Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Rfx1P48377 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Mir7005-201ENSMUST00000185089 69 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm18356-201ENSMUST00000185677 623 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm29650-201ENSMUST00000188485 742 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm29598-201ENSMUST00000188996 588 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm37979-201ENSMUST00000193065 712 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm37196-201ENSMUST00000194762 906 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm5554-201ENSMUST00000199726 1206 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm43810-201ENSMUST00000201018 232 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm44252-201ENSMUST00000204187 330 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm44058-201ENSMUST00000204335 467 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.75□□□□□ -1.17
Rfx1P48377 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm33178-201ENSMUST00000212090 257 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm18704-201ENSMUST00000219736 446 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 AC152979.4-201ENSMUST00000219893 379 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.75□□□□□ -1.17
Rfx1P48377 AC113031.2-201ENSMUST00000226132 579 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Rfx1P48377 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Rfx1P48377 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Rfx1P48377 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm21731-201ENSMUST00000079524 489 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Rfx1P48377 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Rfx1P48377 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Rfx1P48377 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm36947-201ENSMUST00000194709 2249 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm15185-201ENSMUST00000117397 746 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm7244-201ENSMUST00000164658 455 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm9672-201ENSMUST00000166437 425 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm19815-201ENSMUST00000175818 335 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm27152-201ENSMUST00000183828 99 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28739-201ENSMUST00000185415 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28219-201ENSMUST00000185452 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28303-201ENSMUST00000185642 747 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29244-201ENSMUST00000185825 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29437-201ENSMUST00000185865 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29412-201ENSMUST00000185869 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28910-201ENSMUST00000185921 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28812-201ENSMUST00000185963 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29468-201ENSMUST00000185978 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28854-201ENSMUST00000186218 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28636-201ENSMUST00000186353 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28452-201ENSMUST00000186623 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29298-201ENSMUST00000186704 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28227-201ENSMUST00000186862 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28796-201ENSMUST00000186905 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28473-201ENSMUST00000187325 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28949-201ENSMUST00000187805 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28773-201ENSMUST00000187925 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29422-201ENSMUST00000188062 694 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28787-201ENSMUST00000188357 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29451-201ENSMUST00000188862 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29033-201ENSMUST00000189114 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29614-201ENSMUST00000189263 694 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28751-201ENSMUST00000189287 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29559-201ENSMUST00000189412 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28272-201ENSMUST00000189512 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28483-201ENSMUST00000189519 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28123-201ENSMUST00000189725 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28368-201ENSMUST00000189804 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29119-201ENSMUST00000189973 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28716-201ENSMUST00000190217 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm29239-201ENSMUST00000190304 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28837-201ENSMUST00000190397 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28531-201ENSMUST00000190529 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm28165-201ENSMUST00000190669 694 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm32347-201ENSMUST00000192944 696 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm37990-201ENSMUST00000195821 696 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms