Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm20486-201ENSMUST00000101544 128 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm23311-201ENSMUST00000104152 134 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm13835-201ENSMUST00000118459 685 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm11774-201ENSMUST00000118601 293 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm25439-201ENSMUST00000158280 131 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm8185-201ENSMUST00000160999 669 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm24155-201ENSMUST00000175259 110 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm20620-201ENSMUST00000177528 168 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Mir7212-201ENSMUST00000184098 61 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Mir7058-201ENSMUST00000184637 75 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm9127-201ENSMUST00000188041 985 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm37503-201ENSMUST00000192088 319 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm2602-201ENSMUST00000202112 571 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm45596-201ENSMUST00000209279 434 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm19921-201ENSMUST00000210505 703 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm18592-201ENSMUST00000221529 276 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.37□□□□□ -1.55
Tnfsf4P43488 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tnfsf4P43488 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm11826-201ENSMUST00000118781 438 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm11761-201ENSMUST00000121392 445 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm29201-201ENSMUST00000189120 431 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm37430-201ENSMUST00000193039 196 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm5087-204ENSMUST00000225820 645 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms