Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm12073-201ENSMUST00000117382 524 ntBASIC5.77□□□□□ -1.49
HttP42859 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.77□□□□□ -1.49
HttP42859 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm22235-201ENSMUST00000157085 110 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm23069-201ENSMUST00000158240 311 ntBASIC5.77□□□□□ -1.49
HttP42859 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.77□□□□□ -1.49
HttP42859 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.77□□□□□ -1.49
HttP42859 Gm37716-201ENSMUST00000193553 947 ntBASIC5.77□□□□□ -1.49
HttP42859 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.77□□□□□ -1.49
HttP42859 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
HttP42859 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HttP42859 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.77□□□□□ -1.49
HttP42859 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.77□□□□□ -1.49
HttP42859 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
HttP42859 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm25748-201ENSMUST00000175487 70 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm27568-201ENSMUST00000184220 99 ntBASIC5.77□□□□□ -1.49
HttP42859 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm37088-201ENSMUST00000193887 406 ntBASIC5.77□□□□□ -1.49
HttP42859 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC5.76□□□□□ -1.49
HttP42859 CT009480.1-201ENSMUST00000225771 4480 ntBASIC5.76□□□□□ -1.49
HttP42859 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HttP42859 Gm24403-201ENSMUST00000104616 130 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm6884-201ENSMUST00000119318 615 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm15828-201ENSMUST00000119911 522 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm5405-201ENSMUST00000120478 609 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm29474-201ENSMUST00000187688 379 ntBASIC5.76□□□□□ -1.49
HttP42859 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.76□□□□□ -1.49
HttP42859 Olfr881-201ENSMUST00000074611 948 ntBASIC5.76□□□□□ -1.49
HttP42859 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.76□□□□□ -1.49
HttP42859 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
HttP42859 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HttP42859 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.76□□□□□ -1.49
HttP42859 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.76□□□□□ -1.49
HttP42859 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.76□□□□□ -1.49
HttP42859 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.76□□□□□ -1.49
HttP42859 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HttP42859 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.75□□□□□ -1.49
HttP42859 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.75□□□□□ -1.49
HttP42859 Gm11196-201ENSMUST00000119052 395 ntBASIC5.75□□□□□ -1.49
HttP42859 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm23465-201ENSMUST00000157134 262 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm24730-201ENSMUST00000158228 117 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm27564-201ENSMUST00000185196 96 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.75□□□□□ -1.49
HttP42859 Gm18601-201ENSMUST00000220831 634 ntBASIC5.75□□□□□ -1.49
HttP42859 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HttP42859 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.75□□□□□ -1.49
HttP42859 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HttP42859 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.75□□□□□ -1.49
HttP42859 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.75□□□□□ -1.49
HttP42859 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HttP42859 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HttP42859 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HttP42859 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms