Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Traf1P39428 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Traf1P39428 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Traf1P39428 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Traf1P39428 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Gm7927-201ENSMUST00000118818 880 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm12488-201ENSMUST00000122449 499 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm23669-201ENSMUST00000157470 128 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm23224-201ENSMUST00000158122 271 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm25433-201ENSMUST00000158283 286 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm37308-201ENSMUST00000194684 100 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm43456-201ENSMUST00000202519 457 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm33178-201ENSMUST00000212090 257 ntBASIC6.81□□□□□ -1.32
Traf1P39428 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.81□□□□□ -1.32
Traf1P39428 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm16335-201ENSMUST00000077495 309 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Gm23737-201ENSMUST00000082547 159 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Traf1P39428 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.81□□□□□ -1.32
Traf1P39428 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.81□□□□□ -1.32
Traf1P39428 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Traf1P39428 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.81□□□□□ -1.32
Traf1P39428 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Traf1P39428 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.8□□□□□ -1.32
Traf1P39428 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm12931-201ENSMUST00000117046 324 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm14335-201ENSMUST00000119165 810 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm24685-201ENSMUST00000157764 285 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm17511-201ENSMUST00000172206 342 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.8□□□□□ -1.32
Traf1P39428 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Mir7653-201ENSMUST00000184358 61 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Mir7674-201ENSMUST00000184964 63 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Gm37072-201ENSMUST00000194570 837 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm44219-201ENSMUST00000203005 273 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm44432-201ENSMUST00000203342 938 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm17994-201ENSMUST00000209260 533 ntBASIC6.8□□□□□ -1.32
Traf1P39428 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.8□□□□□ -1.32
Traf1P39428 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Traf1P39428 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Traf1P39428 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.8□□□□□ -1.32
Traf1P39428 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms