Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.09□□□□□ -1.59
P20040 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.09□□□□□ -1.6
P20040 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
P20040 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.09□□□□□ -1.6
P20040 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.08□□□□□ -1.6
P20040 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.08□□□□□ -1.6
P20040 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
P20040 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Gm12193-201ENSMUST00000117250 379 ntBASIC5.08□□□□□ -1.6
P20040 Gm13428-201ENSMUST00000117540 365 ntBASIC5.08□□□□□ -1.6
P20040 Gm14529-201ENSMUST00000117894 406 ntBASIC5.08□□□□□ -1.6
P20040 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.08□□□□□ -1.6
P20040 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Snora47-201ENSMUST00000157483 138 ntBASIC5.08□□□□□ -1.6
P20040 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.08□□□□□ -1.6
P20040 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.08□□□□□ -1.6
P20040 Gm8032-201ENSMUST00000171009 574 ntBASIC5.08□□□□□ -1.6
P20040 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm6223-201ENSMUST00000178436 871 ntBASIC5.08□□□□□ -1.6
P20040 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.08□□□□□ -1.6
P20040 Gm27004-201ENSMUST00000183300 727 ntBASIC5.08□□□□□ -1.6
P20040 Gm27460-201ENSMUST00000184213 100 ntBASIC5.08□□□□□ -1.6
P20040 Gm18342-201ENSMUST00000186987 694 ntBASIC5.08□□□□□ -1.6
P20040 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm2427-201ENSMUST00000189121 881 ntBASIC5.08□□□□□ -1.6
P20040 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.08□□□□□ -1.6
P20040 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.08□□□□□ -1.6
P20040 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.08□□□□□ -1.6
P20040 Gm2040-201ENSMUST00000202979 289 ntBASIC5.08□□□□□ -1.6
P20040 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 Gm44134-202ENSMUST00000204777 545 ntBASIC5.08□□□□□ -1.6
P20040 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.08□□□□□ -1.6
P20040 Gm45722-201ENSMUST00000213075 466 ntBASIC5.08□□□□□ -1.6
P20040 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.08□□□□□ -1.6
P20040 Gm8137-201ENSMUST00000218997 463 ntBASIC5.08□□□□□ -1.6
P20040 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.08□□□□□ -1.6
P20040 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.08□□□□□ -1.6
P20040 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Gm17165-201ENSMUST00000096155 493 ntBASIC5.08□□□□□ -1.6
P20040 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.08□□□□□ -1.6
P20040 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.08□□□□□ -1.6
P20040 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.08□□□□□ -1.6
P20040 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
P20040 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
P20040 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
P20040 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
P20040 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.07□□□□□ -1.6
P20040 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.07□□□□□ -1.6
P20040 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.07□□□□□ -1.6
P20040 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
P20040 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
P20040 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.07□□□□□ -1.6
P20040 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
P20040 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
P20040 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
P20040 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms