Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.56□□□□□ -1.68
Hmgb3O54879 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Hmgb3O54879 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.56□□□□□ -1.68
Hmgb3O54879 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.56□□□□□ -1.68
Hmgb3O54879 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Mir449c-201ENSMUST00000102192 109 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm25396-201ENSMUST00000103981 133 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm11270-201ENSMUST00000117685 471 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm14054-201ENSMUST00000120744 704 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm14679-201ENSMUST00000121536 722 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm12110-201ENSMUST00000121601 579 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm16125-201ENSMUST00000159003 339 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm21999-201ENSMUST00000165985 387 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm26557-201ENSMUST00000180756 493 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm36991-201ENSMUST00000191800 648 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm7804-202ENSMUST00000194187 854 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm7181-201ENSMUST00000202197 434 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm18591-201ENSMUST00000220568 763 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Hmgb3O54879 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Glycam1-204ENSMUST00000228895 641 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Hmgb3O54879 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm23927-201ENSMUST00000082466 215 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm17165-201ENSMUST00000096155 493 ntBASIC4.55□□□□□ -1.68
Hmgb3O54879 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Hmgb3O54879 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.55□□□□□ -1.68
Hmgb3O54879 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 AC132465.1-201ENSMUST00000219938 1307 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Sms-ps-201ENSMUST00000121773 1101 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hmgb3O54879 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hmgb3O54879 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm21399-201ENSMUST00000180210 597 ntBASIC4.54□□□□□ -1.68
Hmgb3O54879 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC4.54□□□□□ -1.68
Hmgb3O54879 Gm28883-201ENSMUST00000189256 369 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms