Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 CT009480.3-201ENSMUST00000224051 3032 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm26376-201ENSMUST00000104784 110 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm22870-201ENSMUST00000157501 112 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm29650-201ENSMUST00000188485 742 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm21735-201ENSMUST00000190360 696 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm5436-201ENSMUST00000058103 643 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm23511-201ENSMUST00000083084 164 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm15006-201ENSMUST00000121419 1122 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm11759-201ENSMUST00000121742 464 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm7609-204ENSMUST00000161424 461 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm17511-201ENSMUST00000172206 342 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Mir6539-201ENSMUST00000183732 110 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm43779-201ENSMUST00000196691 829 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm5087-204ENSMUST00000225820 645 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm20706-201ENSMUST00000175985 2023 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm38276-201ENSMUST00000192446 1343 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm14158-201ENSMUST00000118409 308 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm23553-201ENSMUST00000157817 295 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm24359-201ENSMUST00000158418 221 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm25942-201ENSMUST00000180080 110 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Mir7687-201ENSMUST00000184722 59 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm29551-201ENSMUST00000190913 698 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm31211-201ENSMUST00000199170 253 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm43973-201ENSMUST00000203562 210 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm19936-201ENSMUST00000216414 838 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm45084-201ENSMUST00000207096 1957 ntBASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a4A2AX52 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm37894-201ENSMUST00000195416 2599 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm15950-201ENSMUST00000162902 1973 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm11975-201ENSMUST00000118772 481 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm15660-201ENSMUST00000118997 478 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm15971-201ENSMUST00000119372 211 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 H3f3c-201ENSMUST00000119459 411 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm12115-201ENSMUST00000119969 447 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm12854-201ENSMUST00000128518 297 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms