Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm24940-201ENSMUST00000158326 108 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm25906-201ENSMUST00000158489 126 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 Mir3080-201ENSMUST00000175010 79 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm26738-201ENSMUST00000181312 601 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm4832-201ENSMUST00000182679 399 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm7825-201ENSMUST00000204046 416 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm4374-201ENSMUST00000204929 424 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm45008-201ENSMUST00000206420 493 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm4032-201ENSMUST00000210886 487 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Gm4012-201ENSMUST00000221504 581 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.89□□□□□ -1.47
Scn1aA2APX8 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scn1aA2APX8 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm25422-201ENSMUST00000104219 129 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm14212-201ENSMUST00000122023 826 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm23883-201ENSMUST00000122686 290 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm45082-201ENSMUST00000206082 601 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm45405-201ENSMUST00000211544 609 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.88□□□□□ -1.47
Scn1aA2APX8 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scn1aA2APX8 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm4989-201ENSMUST00000118711 749 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm2325-201ENSMUST00000186637 581 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm6137-201ENSMUST00000187552 578 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm29592-201ENSMUST00000189434 370 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm28467-201ENSMUST00000190981 318 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm14874-201ENSMUST00000118995 438 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm11197-201ENSMUST00000145158 839 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm22596-201ENSMUST00000157601 316 ntBASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1aA2APX8 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.87□□□□□ -1.47
Scn1aA2APX8 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms