Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm23115-201ENSMUST00000158480 108 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm21959-201ENSMUST00000178439 452 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm43850-201ENSMUST00000202021 578 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm5306-201ENSMUST00000203325 757 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm8319-201ENSMUST00000205708 641 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm32526-201ENSMUST00000221878 981 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm15732-201ENSMUST00000079794 480 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 AW046200-203ENSMUST00000211787 2479 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.24□□□□□ -1.57
CtcflA2APF3 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.24□□□□□ -1.57
CtcflA2APF3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.24□□□□□ -1.57
CtcflA2APF3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm13321-201ENSMUST00000117101 400 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm13493-201ENSMUST00000120318 493 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm13669-201ENSMUST00000122366 457 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm25116-201ENSMUST00000157191 122 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Snora47-201ENSMUST00000157483 138 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm37700-201ENSMUST00000192617 965 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm38237-201ENSMUST00000193366 376 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm8869-201ENSMUST00000195222 947 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm7554-201ENSMUST00000202282 574 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm18600-201ENSMUST00000207205 505 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm6702-201ENSMUST00000208496 471 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm6906-201ENSMUST00000218014 569 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm9535-201ENSMUST00000218499 768 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm7413-201ENSMUST00000219498 462 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm19340-201ENSMUST00000221995 345 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CtcflA2APF3 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.23□□□□□ -1.57
CtcflA2APF3 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CtcflA2APF3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CtcflA2APF3 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms