Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim3Q9R1R2 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm20486-201ENSMUST00000101544 128 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm23294-201ENSMUST00000104150 164 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm12193-201ENSMUST00000117250 379 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm13641-201ENSMUST00000117993 473 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm9597-201ENSMUST00000171913 602 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm19560-201ENSMUST00000177510 514 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm27460-201ENSMUST00000184213 100 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm5886-202ENSMUST00000203957 522 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm44571-201ENSMUST00000208092 533 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Thoc7-209ENSMUST00000225325 765 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim3Q9R1R2 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.46□□□□□ -1.53
Trim3Q9R1R2 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm25345-201ENSMUST00000104505 133 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm12244-201ENSMUST00000119500 291 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm14563-201ENSMUST00000120571 354 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm14065-201ENSMUST00000120848 585 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm14237-201ENSMUST00000122080 430 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm22599-201ENSMUST00000157597 132 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm22636-201ENSMUST00000158142 275 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm23050-201ENSMUST00000158775 165 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm20480-201ENSMUST00000173953 250 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm26057-201ENSMUST00000178099 165 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm3650-201ENSMUST00000180600 747 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm18342-201ENSMUST00000186987 694 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm2427-201ENSMUST00000189121 881 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm19104-201ENSMUST00000198392 679 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm44108-201ENSMUST00000203525 422 ntBASIC5.46□□□□□ -1.54
Trim3Q9R1R2 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms