Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm5166-201ENSMUST00000121332 573 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm24847-201ENSMUST00000158032 108 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm24176-201ENSMUST00000158928 121 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm6808-201ENSMUST00000162341 807 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm18560-201ENSMUST00000173463 1123 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Mir7093-201ENSMUST00000184195 101 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm29156-201ENSMUST00000187764 499 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm37689-201ENSMUST00000193139 275 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm5711-201ENSMUST00000197896 421 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm43675-201ENSMUST00000199468 1184 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm42673-201ENSMUST00000202676 337 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm44972-201ENSMUST00000206419 406 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm29818-201ENSMUST00000218070 165 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 AC133203.2-201ENSMUST00000226709 464 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 AW822073-201ENSMUST00000075305 555 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm24460-201ENSMUST00000082731 106 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Rian-209ENSMUST00000182406 3476 ntBASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ube3bQ9ES34 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm14269-201ENSMUST00000120455 306 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm5287-201ENSMUST00000120666 598 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm11882-201ENSMUST00000121463 506 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm7094-201ENSMUST00000178379 366 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm29556-201ENSMUST00000187591 696 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm9541-201ENSMUST00000188409 502 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm38334-201ENSMUST00000195060 313 ntBASIC8.29□□□□□ -1.08
Ube3bQ9ES34 Gm43308-201ENSMUST00000197236 373 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms