Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm19033-201ENSMUST00000208516 964 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm25345-201ENSMUST00000104505 133 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm22371-201ENSMUST00000104588 130 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm7146-201ENSMUST00000116079 739 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm12077-201ENSMUST00000117049 364 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm14580-201ENSMUST00000119122 718 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm15300-201ENSMUST00000122324 279 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm26738-201ENSMUST00000181312 601 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm37191-201ENSMUST00000193346 388 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm38040-201ENSMUST00000193505 225 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm4083-201ENSMUST00000207158 451 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm8523-201ENSMUST00000211386 552 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 AV026068-216ENSMUST00000223874 328 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm25515-201ENSMUST00000083858 157 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Lima1Q9ERG0 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm22916-201ENSMUST00000157616 119 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm24767-201ENSMUST00000158509 95 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm16164-201ENSMUST00000160078 468 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm17366-201ENSMUST00000167629 187 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm29201-201ENSMUST00000189120 431 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm37503-201ENSMUST00000192088 319 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm43928-201ENSMUST00000203737 409 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms