Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44053-201ENSMUST00000203364 929 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm5582-201ENSMUST00000075251 522 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Cdc40Q9DC48 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Mir449c-201ENSMUST00000102192 109 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm15073-201ENSMUST00000117432 634 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm15078-201ENSMUST00000118371 782 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm14842-201ENSMUST00000119577 269 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm23149-201ENSMUST00000158837 230 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm24741-201ENSMUST00000158857 106 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm3242-201ENSMUST00000171273 485 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Mir3572-201ENSMUST00000175549 86 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Mir6971-201ENSMUST00000183497 63 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm43215-201ENSMUST00000199108 252 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 LOC665443-201ENSMUST00000212284 796 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Mir375-201ENSMUST00000083682 64 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Zfp850-201ENSMUST00000099111 941 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.39□□□□□ -1.55
Cdc40Q9DC48 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.39□□□□□ -1.55
Cdc40Q9DC48 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms