Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Mir6940-201ENSMUST00000183447 70 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Mir8105-201ENSMUST00000184718 89 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm29464-201ENSMUST00000187692 513 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Trbv28-201ENSMUST00000192804 264 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm22897-202ENSMUST00000197782 127 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm42776-201ENSMUST00000198031 406 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm9057-201ENSMUST00000198791 296 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm42804-201ENSMUST00000199701 178 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm43459-201ENSMUST00000202093 331 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm4822-201ENSMUST00000077551 479 ntBASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sf3a3Q9D554 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm22499-201ENSMUST00000104501 135 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm13118-201ENSMUST00000120402 549 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm15840-201ENSMUST00000122099 943 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm25782-201ENSMUST00000122526 289 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm10157-201ENSMUST00000139408 343 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm24442-201ENSMUST00000157238 327 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Mir5107-201ENSMUST00000175586 88 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm27037-201ENSMUST00000182270 960 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm36943-201ENSMUST00000194422 282 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm42558-201ENSMUST00000200982 265 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm44332-201ENSMUST00000203712 433 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm5314-201ENSMUST00000204852 466 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm18600-201ENSMUST00000207205 505 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm8412-201ENSMUST00000077493 440 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sf3a3Q9D554 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sf3a3Q9D554 Gm25317-201ENSMUST00000116824 129 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms