Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm25415-201ENSMUST00000104220 132 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm11472-201ENSMUST00000121305 556 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm20637-201ENSMUST00000175715 462 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm43744-201ENSMUST00000196387 688 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm44319-201ENSMUST00000196974 93 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm4548-201ENSMUST00000208487 509 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm45473-201ENSMUST00000211452 616 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 AC132104.1-201ENSMUST00000213615 260 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 AC173345.3-201ENSMUST00000221245 1093 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Glycam1-204ENSMUST00000228895 641 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ddx56Q9D0R4 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12939-201ENSMUST00000117303 165 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm13156-201ENSMUST00000118348 321 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm13818-201ENSMUST00000119441 511 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm11708-201ENSMUST00000119530 832 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12654-201ENSMUST00000120387 587 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm14065-201ENSMUST00000120848 585 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12399-201ENSMUST00000121475 446 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12327-201ENSMUST00000121729 1168 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm26162-201ENSMUST00000157793 132 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm38030-201ENSMUST00000192376 475 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms