Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm24434-201ENSMUST00000104081 132 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm25564-201ENSMUST00000104604 132 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm14515-201ENSMUST00000121327 216 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm12399-201ENSMUST00000121475 446 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm24383-201ENSMUST00000122691 333 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm25669-201ENSMUST00000157699 112 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm24733-201ENSMUST00000158863 253 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm27044-201ENSMUST00000183033 796 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm27653-201ENSMUST00000185037 136 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm38268-201ENSMUST00000195813 193 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm8861-201ENSMUST00000196346 832 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm44845-201ENSMUST00000208773 335 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm18467-201ENSMUST00000208805 434 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm22300-201ENSMUST00000082661 126 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm10780-201ENSMUST00000099459 285 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm44897-201ENSMUST00000206187 1341 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm10936-201ENSMUST00000105264 252 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm16074-201ENSMUST00000119524 444 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm8317-201ENSMUST00000121261 471 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm15508-201ENSMUST00000160330 325 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm23162-201ENSMUST00000175081 121 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm26923-201ENSMUST00000182615 996 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm27315-201ENSMUST00000183977 154 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm37758-201ENSMUST00000194275 629 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm44312-201ENSMUST00000203536 469 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm45008-201ENSMUST00000206420 493 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms