Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm2979-201ENSMUST00000193442 463 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm37341-201ENSMUST00000194680 371 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm37809-201ENSMUST00000195050 931 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm7181-201ENSMUST00000202197 434 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm29815-201ENSMUST00000202418 178 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm10688-201ENSMUST00000214985 520 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm7570-201ENSMUST00000215246 698 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm3266-201ENSMUST00000217832 591 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm18405-201ENSMUST00000220743 511 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.7□□□□□ -1.5
Cstf3Q99LI7 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm12099-201ENSMUST00000118660 750 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm14842-201ENSMUST00000119577 269 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm7350-201ENSMUST00000120964 636 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm13366-201ENSMUST00000122198 970 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm22223-201ENSMUST00000157360 125 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm22428-201ENSMUST00000158554 132 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm20453-201ENSMUST00000173968 226 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm24103-201ENSMUST00000174930 77 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm26923-201ENSMUST00000182615 996 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm27348-201ENSMUST00000184511 170 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm21742-201ENSMUST00000189352 548 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm44538-201ENSMUST00000205615 348 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm6702-201ENSMUST00000208496 471 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr192-201ENSMUST00000080251 925 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.69□□□□□ -1.5
Cstf3Q99LI7 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms