Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm24434-201ENSMUST00000104081 132 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm6446-201ENSMUST00000120604 818 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm15335-201ENSMUST00000122442 411 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm22867-201ENSMUST00000157499 109 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm8993-201ENSMUST00000182182 983 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Mir6412-201ENSMUST00000184477 97 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37375-201ENSMUST00000193859 387 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37385-201ENSMUST00000195223 387 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm43798-201ENSMUST00000202056 394 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm6068-201ENSMUST00000222270 387 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm16418-201ENSMUST00000118577 171 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm11826-201ENSMUST00000118781 438 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm13866-201ENSMUST00000118901 968 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm16423-201ENSMUST00000120078 947 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26211-201ENSMUST00000158578 129 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37966-201ENSMUST00000193122 326 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.85□□□□□ -1.47
Ccdc28aQ8CEI3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms