Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Glycam1-204ENSMUST00000228895 641 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.65□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Mir688-201ENSMUST00000102055 75 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm23527-201ENSMUST00000104570 130 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12850-201ENSMUST00000119210 436 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm13444-201ENSMUST00000119445 522 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm2986-201ENSMUST00000121603 382 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm11609-201ENSMUST00000121926 793 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm22650-201ENSMUST00000175138 105 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm18953-201ENSMUST00000175694 300 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6489-201ENSMUST00000178167 696 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8874-201ENSMUST00000196826 286 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm5735-201ENSMUST00000207053 167 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm45448-201ENSMUST00000211739 209 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9267-201ENSMUST00000222831 404 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Mir1960-201ENSMUST00000157488 78 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm11107-201ENSMUST00000165414 505 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6047-201ENSMUST00000167221 574 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm17046-201ENSMUST00000168078 850 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm26738-201ENSMUST00000181312 601 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm36932-201ENSMUST00000195226 929 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43717-201ENSMUST00000198684 310 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm34272-201ENSMUST00000208886 253 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm7570-201ENSMUST00000215246 698 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 AC155834.1-201ENSMUST00000220033 498 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms