Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm23839-201ENSMUST00000116957 109 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm22160-201ENSMUST00000158405 328 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm23408-201ENSMUST00000158523 265 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm6472-201ENSMUST00000178147 651 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm27006-201ENSMUST00000182218 943 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm7890-201ENSMUST00000204877 601 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm17165-201ENSMUST00000096155 493 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.81□□□□□ -1.48
Trub1Q8C0D0 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm14772-201ENSMUST00000116562 514 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm16016-201ENSMUST00000120831 550 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm6175-201ENSMUST00000121351 400 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm23430-201ENSMUST00000122490 314 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm6872-201ENSMUST00000165001 700 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm20530-201ENSMUST00000174261 254 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm25246-201ENSMUST00000175476 69 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm10410-201ENSMUST00000180138 384 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm26898-201ENSMUST00000181678 384 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm37609-201ENSMUST00000191778 678 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm2040-201ENSMUST00000202979 289 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm32526-201ENSMUST00000221878 981 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Gm8526-201ENSMUST00000079153 475 ntBASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trub1Q8C0D0 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms