Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm13451-201ENSMUST00000117649 592 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm15877-201ENSMUST00000121897 964 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm23224-201ENSMUST00000158122 271 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm42454-201ENSMUST00000196805 1181 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm6009-201ENSMUST00000210848 280 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 AC123835.1-201ENSMUST00000214362 670 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 AC127302.1-201ENSMUST00000215973 1111 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm4012-201ENSMUST00000221504 581 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 AC126554.2-201ENSMUST00000223259 400 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 AC156802.1-201ENSMUST00000223623 579 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 n-R5s215-201ENSMUST00000082480 104 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm43062-201ENSMUST00000196302 1319 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 CT009757.5-201ENSMUST00000221858 3425 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm19368-201ENSMUST00000221258 4424 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm44440-201ENSMUST00000203139 2373 ntBASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm36936-201ENSMUST00000194508 2749 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm8401-201ENSMUST00000120248 1739 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm14599-201ENSMUST00000120469 474 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm22818-201ENSMUST00000157446 104 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm3307-201ENSMUST00000176164 632 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm27409-201ENSMUST00000184727 80 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm37341-201ENSMUST00000194680 371 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm43708-201ENSMUST00000198857 961 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm44053-201ENSMUST00000203364 929 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm18255-201ENSMUST00000211316 765 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms