Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Mir706-201ENSMUST00000102262 84 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Rnu11-201ENSMUST00000104135 134 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm5601-201ENSMUST00000118909 972 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm8312-201ENSMUST00000119380 618 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm11387-201ENSMUST00000120266 772 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm12175-201ENSMUST00000122081 345 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm25550-201ENSMUST00000158079 128 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm23387-201ENSMUST00000158586 107 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm17967-201ENSMUST00000195319 647 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm9373-201ENSMUST00000208724 599 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm6436-201ENSMUST00000077163 451 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.06□□□□□ -1.44
Rnf38Q8BI21 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm24790-201ENSMUST00000104285 132 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm14098-201ENSMUST00000119295 623 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm14847-201ENSMUST00000121978 519 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm25898-201ENSMUST00000158303 106 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm26595-201ENSMUST00000181585 484 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm27299-201ENSMUST00000184593 103 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm38201-201ENSMUST00000192143 387 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm7019-201ENSMUST00000194122 369 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm5050-201ENSMUST00000197164 775 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm17824-201ENSMUST00000197690 805 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Gm7557-201ENSMUST00000221935 865 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.05□□□□□ -1.44
Rnf38Q8BI21 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rnf38Q8BI21 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms