Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm13770-201ENSMUST00000117149 305 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm11833-201ENSMUST00000118393 853 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm13579-201ENSMUST00000118519 517 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm12465-201ENSMUST00000118591 300 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm14349-201ENSMUST00000137155 902 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm22235-201ENSMUST00000157085 110 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm22895-201ENSMUST00000157508 308 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm23553-201ENSMUST00000157817 295 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm24767-201ENSMUST00000158509 95 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm3025-201ENSMUST00000163454 489 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm3077-201ENSMUST00000165903 627 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm2878-201ENSMUST00000170173 486 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm22420-201ENSMUST00000178795 126 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm22917-201ENSMUST00000180116 110 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm28017-201ENSMUST00000183434 126 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm18325-201ENSMUST00000203228 835 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm18645-202ENSMUST00000212222 760 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm8412-201ENSMUST00000077493 440 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Ddx55Q6ZPL9 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm11433-201ENSMUST00000118318 228 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm5387-201ENSMUST00000119776 857 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm26355-201ENSMUST00000158220 105 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm22261-201ENSMUST00000158691 324 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm20480-201ENSMUST00000173953 250 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21241-201ENSMUST00000179551 934 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm5430-201ENSMUST00000182525 915 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Mir7006-201ENSMUST00000183624 69 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm20819-201ENSMUST00000191091 925 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm20871-201ENSMUST00000191322 931 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm32158-201ENSMUST00000200135 404 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm44219-201ENSMUST00000203005 273 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm2691-201ENSMUST00000203205 901 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm7825-201ENSMUST00000204046 416 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 Gm10709-201ENSMUST00000213318 480 ntBASIC6.89□□□□□ -1.31
Ddx55Q6ZPL9 AC159819.1-201ENSMUST00000213911 328 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms