Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Mir546-201ENSMUST00000102105 121 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm24429-201ENSMUST00000104076 132 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm13681-201ENSMUST00000117925 210 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm22916-201ENSMUST00000157616 119 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm4587-201ENSMUST00000209135 637 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.25□□□□□ -1.41
Ccdc88cQ6VGS5 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm11908-201ENSMUST00000117755 347 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm4342-201ENSMUST00000118982 367 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm12854-201ENSMUST00000128518 297 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm2959-201ENSMUST00000169844 621 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm20453-201ENSMUST00000173968 226 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Mir7087-201ENSMUST00000184840 70 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm27985-201ENSMUST00000185112 378 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm7733-201ENSMUST00000199038 919 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm7665-201ENSMUST00000076710 297 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc88cQ6VGS5 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm11227-201ENSMUST00000119774 471 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm11481-201ENSMUST00000120069 255 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm11804-201ENSMUST00000121663 468 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 AV026068-231ENSMUST00000225862 482 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm25906-201ENSMUST00000158489 126 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm3170-201ENSMUST00000168753 850 ntBASIC6.23□□□□□ -1.41
Ccdc88cQ6VGS5 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms