Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm23739-201ENSMUST00000102295 108 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm24434-201ENSMUST00000104081 132 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm15781-201ENSMUST00000120216 323 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm12044-201ENSMUST00000120335 213 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm15502-201ENSMUST00000121449 208 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm14380-201ENSMUST00000122298 431 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Mir1960-201ENSMUST00000157488 78 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm24719-201ENSMUST00000157520 110 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm26468-201ENSMUST00000158644 106 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm22529-201ENSMUST00000158817 123 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Mir3097-201ENSMUST00000175356 67 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Mir6986-201ENSMUST00000184483 58 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm29470-201ENSMUST00000188007 696 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm42818-201ENSMUST00000198869 987 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col8a1Q00780 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.74□□□□□ -1.49
Col8a1Q00780 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm25582-201ENSMUST00000083412 110 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm38244-201ENSMUST00000191737 2586 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm37984-201ENSMUST00000191641 3733 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.74□□□□□ -1.49
Col8a1Q00780 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col8a1Q00780 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.74□□□□□ -1.49
Col8a1Q00780 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.73□□□□□ -1.49
Col8a1Q00780 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.73□□□□□ -1.49
Col8a1Q00780 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col8a1Q00780 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms