Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm23995-201ENSMUST00000158060 129 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm3605-201ENSMUST00000185858 440 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm42886-201ENSMUST00000199214 466 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Gm42961-201ENSMUST00000202023 181 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm45850-201ENSMUST00000212536 338 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Gm18591-201ENSMUST00000220568 763 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Gm6104-201ENSMUST00000078030 603 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Gm10540-201ENSMUST00000097581 276 ntBASIC5.68□□□□□ -1.5
Fdft1P53798 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Fdft1P53798 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Fdft1P53798 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Fdft1P53798 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm20486-201ENSMUST00000101544 128 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm26300-201ENSMUST00000102282 94 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm26144-201ENSMUST00000104475 132 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm11902-201ENSMUST00000118849 270 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm15400-201ENSMUST00000118944 601 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm15660-201ENSMUST00000118997 478 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm24477-201ENSMUST00000157438 103 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm22599-201ENSMUST00000157597 132 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Scarna10-201ENSMUST00000158992 325 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Fdft1P53798 Mir6361-201ENSMUST00000185079 101 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm28527-201ENSMUST00000185210 297 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm19900-201ENSMUST00000207285 576 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.67□□□□□ -1.5
Fdft1P53798 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm6068-201ENSMUST00000222270 387 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Olfr519-201ENSMUST00000084752 960 ntBASIC5.67□□□□□ -1.5
Fdft1P53798 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Fdft1P53798 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Fdft1P53798 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Fdft1P53798 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Fdft1P53798 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Fdft1P53798 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Fdft1P53798 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Fdft1P53798 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Fdft1P53798 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Fdft1P53798 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.66□□□□□ -1.5
Fdft1P53798 Gm22374-201ENSMUST00000104583 132 ntBASIC5.66□□□□□ -1.5
Fdft1P53798 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Fdft1P53798 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Fdft1P53798 Gm12193-201ENSMUST00000117250 379 ntBASIC5.66□□□□□ -1.5
Fdft1P53798 Gm14529-201ENSMUST00000117894 406 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms