Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm38090-201ENSMUST00000195733 1942 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 AC174797.3-203ENSMUST00000225749 2078 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm11903-201ENSMUST00000118958 727 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm14945-201ENSMUST00000119556 1118 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm6806-201ENSMUST00000120092 1006 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm25057-201ENSMUST00000157366 88 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm22728-201ENSMUST00000158087 129 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm20615-201ENSMUST00000177503 705 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Mir6241-201ENSMUST00000184225 103 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm28894-201ENSMUST00000185214 615 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm37369-201ENSMUST00000194179 615 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm42799-201ENSMUST00000201331 328 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm44050-201ENSMUST00000204263 527 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm44984-201ENSMUST00000207802 394 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.76□□□□□ -1.17
Rfx1P48377 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm6667-201ENSMUST00000217169 564 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 AC112274.2-201ENSMUST00000218436 170 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 AC140393.2-201ENSMUST00000226894 943 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm9788-201ENSMUST00000057038 906 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm5321-201ENSMUST00000072050 447 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.76□□□□□ -1.17
Rfx1P48377 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Rfx1P48377 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Rfx1P48377 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Rfx1P48377 Gm42492-201ENSMUST00000195780 2915 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.75□□□□□ -1.17
Rfx1P48377 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Rfx1P48377 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm23748-201ENSMUST00000104227 131 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm25724-201ENSMUST00000104531 117 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm22710-201ENSMUST00000116892 125 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm15105-201ENSMUST00000117777 204 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm13744-201ENSMUST00000118953 850 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm11976-201ENSMUST00000119236 295 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 Gm12317-201ENSMUST00000122307 319 ntBASIC7.75□□□□□ -1.17
Rfx1P48377 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Rfx1P48377 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms