Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm10936-201ENSMUST00000105264 252 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm15786-201ENSMUST00000121079 450 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm7670-201ENSMUST00000121272 641 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm3216-201ENSMUST00000166927 486 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm3141-201ENSMUST00000168726 499 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm17511-201ENSMUST00000172206 342 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm20549-201ENSMUST00000174804 429 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.54□□□□□ -1.52
Cdx2P43241 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm44053-201ENSMUST00000203364 929 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm2961-201ENSMUST00000211074 772 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm20786-201ENSMUST00000212649 436 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm40692-201ENSMUST00000220411 491 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm18591-201ENSMUST00000220568 763 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Cdx2P43241 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cdx2P43241 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.54□□□□□ -1.52
Cdx2P43241 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Cdx2P43241 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cdx2P43241 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx2P43241 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Cdx2P43241 Gm13681-201ENSMUST00000117925 210 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Gm14175-201ENSMUST00000119835 241 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Gm11925-201ENSMUST00000121375 535 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Mir1963-201ENSMUST00000158594 59 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx2P43241 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cdx2P43241 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.53□□□□□ -1.52
Cdx2P43241 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx2P43241 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.53□□□□□ -1.52
Cdx2P43241 Gm19256-201ENSMUST00000218550 231 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cdx2P43241 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.53□□□□□ -1.52
Cdx2P43241 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cdx2P43241 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.53□□□□□ -1.52
Cdx2P43241 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm22273-201ENSMUST00000104040 132 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm24789-201ENSMUST00000104282 131 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm9429-201ENSMUST00000117804 868 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm6175-201ENSMUST00000121351 400 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm12685-201ENSMUST00000121702 214 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdx2P43241 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms