Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.79□□□□□ -1.48
HttP42859 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.79□□□□□ -1.48
HttP42859 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm22266-201ENSMUST00000104011 138 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm11822-201ENSMUST00000119177 415 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm12422-201ENSMUST00000121431 302 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Olfr151-202ENSMUST00000221099 929 ntBASIC5.79□□□□□ -1.48
HttP42859 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.79□□□□□ -1.48
HttP42859 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.79□□□□□ -1.48
HttP42859 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HttP42859 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.79□□□□□ -1.48
HttP42859 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.79□□□□□ -1.48
HttP42859 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.79□□□□□ -1.48
HttP42859 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
HttP42859 Gm3816-201ENSMUST00000209803 433 ntBASIC5.79□□□□□ -1.48
HttP42859 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HttP42859 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.79□□□□□ -1.48
HttP42859 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
HttP42859 Gm23624-201ENSMUST00000082463 321 ntBASIC5.79□□□□□ -1.48
HttP42859 Gm23875-201ENSMUST00000083711 318 ntBASIC5.79□□□□□ -1.48
HttP42859 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.78□□□□□ -1.48
HttP42859 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm25096-201ENSMUST00000104043 129 ntBASIC5.78□□□□□ -1.48
HttP42859 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.78□□□□□ -1.48
HttP42859 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.78□□□□□ -1.48
HttP42859 Gm4602-201ENSMUST00000203198 308 ntBASIC5.78□□□□□ -1.48
HttP42859 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.78□□□□□ -1.48
HttP42859 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm22758-201ENSMUST00000102275 96 ntBASIC5.78□□□□□ -1.48
HttP42859 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.78□□□□□ -1.48
HttP42859 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HttP42859 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HttP42859 Mir6414-201ENSMUST00000183685 82 ntBASIC5.78□□□□□ -1.48
HttP42859 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.78□□□□□ -1.48
HttP42859 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.78□□□□□ -1.48
HttP42859 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HttP42859 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HttP42859 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.78□□□□□ -1.48
HttP42859 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HttP42859 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
HttP42859 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Gm14628-201ENSMUST00000117508 635 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm23993-201ENSMUST00000157478 144 ntBASIC5.77□□□□□ -1.49
HttP42859 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.77□□□□□ -1.49
HttP42859 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.77□□□□□ -1.49
HttP42859 Gm44074-201ENSMUST00000204562 337 ntBASIC5.77□□□□□ -1.49
HttP42859 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HttP42859 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.77□□□□□ -1.49
HttP42859 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HttP42859 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC5.77□□□□□ -1.49
HttP42859 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HttP42859 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms