Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.84□□□□□ -1.31
Traf1P39428 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Mir5128-201ENSMUST00000175217 84 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Gm27030-201ENSMUST00000182551 464 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm36994-201ENSMUST00000192941 492 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.84□□□□□ -1.31
Traf1P39428 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Traf1P39428 Gm45750-201ENSMUST00000211966 354 ntBASIC6.84□□□□□ -1.31
Traf1P39428 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.84□□□□□ -1.31
Traf1P39428 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Gm8412-201ENSMUST00000077493 440 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Traf1P39428 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Traf1P39428 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Traf1P39428 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.84□□□□□ -1.31
Traf1P39428 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Traf1P39428 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
Traf1P39428 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.83□□□□□ -1.32
Traf1P39428 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Traf1P39428 Gm14756-201ENSMUST00000116395 240 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Gm15970-201ENSMUST00000160623 834 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Gm22698-201ENSMUST00000175375 108 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Mir7008-201ENSMUST00000184398 63 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm18350-201ENSMUST00000187395 955 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm8282-201ENSMUST00000187559 483 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm28640-201ENSMUST00000190918 550 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm18444-201ENSMUST00000191239 629 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm37341-201ENSMUST00000194680 371 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.83□□□□□ -1.32
Traf1P39428 Gm34149-201ENSMUST00000203547 304 ntBASIC6.83□□□□□ -1.32
Traf1P39428 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.83□□□□□ -1.32
Traf1P39428 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Mir143-201ENSMUST00000083511 63 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Traf1P39428 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Traf1P39428 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.83□□□□□ -1.32
Traf1P39428 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Traf1P39428 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Traf1P39428 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Traf1P39428 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm6744-201ENSMUST00000119303 543 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm4853-201ENSMUST00000119359 394 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm12813-201ENSMUST00000119615 902 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm14065-201ENSMUST00000120848 585 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm25439-201ENSMUST00000158280 131 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm9006-201ENSMUST00000165520 841 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm23162-201ENSMUST00000175081 121 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm16531-201ENSMUST00000180658 967 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm1972-201ENSMUST00000181606 964 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm37187-201ENSMUST00000193425 341 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm37196-201ENSMUST00000194762 906 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Traf1P39428 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.82□□□□□ -1.32
Traf1P39428 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.82□□□□□ -1.32
Traf1P39428 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Traf1P39428 Gm6068-201ENSMUST00000222270 387 ntBASIC6.82□□□□□ -1.32
Traf1P39428 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms