Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm18892-201ENSMUST00000217628 881 ntBASIC6.17□□□□□ -1.42
LdlrP35951 Gm18039-201ENSMUST00000217816 728 ntBASIC6.17□□□□□ -1.42
LdlrP35951 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.17□□□□□ -1.42
LdlrP35951 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.17□□□□□ -1.42
LdlrP35951 Gm9237-201ENSMUST00000221499 548 ntBASIC6.17□□□□□ -1.42
LdlrP35951 AV026068-218ENSMUST00000223980 575 ntBASIC6.17□□□□□ -1.42
LdlrP35951 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.17□□□□□ -1.42
LdlrP35951 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.17□□□□□ -1.42
LdlrP35951 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.17□□□□□ -1.42
LdlrP35951 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LdlrP35951 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LdlrP35951 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LdlrP35951 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.17□□□□□ -1.42
LdlrP35951 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LdlrP35951 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LdlrP35951 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.17□□□□□ -1.42
LdlrP35951 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LdlrP35951 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.16□□□□□ -1.42
LdlrP35951 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gm12387-201ENSMUST00000118573 955 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm13690-201ENSMUST00000118989 285 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm12587-201ENSMUST00000120180 427 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm14695-201ENSMUST00000121721 282 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm25179-201ENSMUST00000122632 128 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
LdlrP35951 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LdlrP35951 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LdlrP35951 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm27755-201ENSMUST00000184623 132 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LdlrP35951 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gm43744-201ENSMUST00000196387 688 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm43390-201ENSMUST00000196614 421 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm43036-201ENSMUST00000200594 373 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm18586-201ENSMUST00000217265 518 ntBASIC6.16□□□□□ -1.42
LdlrP35951 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.16□□□□□ -1.42
LdlrP35951 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.16□□□□□ -1.42
LdlrP35951 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.16□□□□□ -1.42
LdlrP35951 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.16□□□□□ -1.42
LdlrP35951 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
LdlrP35951 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LdlrP35951 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LdlrP35951 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.16□□□□□ -1.42
LdlrP35951 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LdlrP35951 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.16□□□□□ -1.42
LdlrP35951 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LdlrP35951 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.15□□□□□ -1.42
LdlrP35951 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LdlrP35951 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LdlrP35951 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
LdlrP35951 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms