Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm28851-202ENSMUST00000189757 484 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm28461-201ENSMUST00000190023 484 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm17981-201ENSMUST00000191109 739 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm5735-201ENSMUST00000207053 167 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm4548-201ENSMUST00000208487 509 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm6702-201ENSMUST00000208496 471 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm45690-201ENSMUST00000210775 246 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccl3P10855 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccl3P10855 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.07□□□□□ -1.6
Ccl3P10855 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccl3P10855 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccl3P10855 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccl3P10855 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ccl3P10855 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccl3P10855 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccl3P10855 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm15766-201ENSMUST00000118025 813 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm2199-201ENSMUST00000119065 874 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm14472-201ENSMUST00000119815 282 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm15428-201ENSMUST00000121352 333 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm26069-201ENSMUST00000157497 277 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm20545-201ENSMUST00000174739 210 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm24103-201ENSMUST00000174930 77 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm43779-201ENSMUST00000196691 829 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm44539-201ENSMUST00000206010 238 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Gm3257-201ENSMUST00000207217 675 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm15500-201ENSMUST00000071523 894 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ccl3P10855 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccl3P10855 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ccl3P10855 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccl3P10855 Gm45528-201ENSMUST00000209854 3145 ntBASIC5.06□□□□□ -1.6
Ccl3P10855 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Ccl3P10855 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccl3P10855 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccl3P10855 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.05□□□□□ -1.6
Ccl3P10855 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccl3P10855 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccl3P10855 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms