Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Chmp6P0C0A3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm12099-201ENSMUST00000118660 750 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm11533-201ENSMUST00000120287 477 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm15877-201ENSMUST00000121897 964 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm12488-201ENSMUST00000122449 499 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm22214-201ENSMUST00000157563 172 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm24363-201ENSMUST00000158440 311 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm9006-201ENSMUST00000165520 841 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm22690-201ENSMUST00000175054 110 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm23450-201ENSMUST00000178285 91 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Mir375-201ENSMUST00000083682 64 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.21□□□□□ -1.42
Chmp6P0C0A3 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm13311-201ENSMUST00000117863 379 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm15715-201ENSMUST00000118032 283 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm15660-201ENSMUST00000118997 478 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm12583-201ENSMUST00000120677 853 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Mir1903-201ENSMUST00000122574 80 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm22636-201ENSMUST00000158142 275 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm24731-201ENSMUST00000158227 131 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm16557-201ENSMUST00000159182 191 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm18199-201ENSMUST00000173820 835 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm24303-201ENSMUST00000178237 126 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm7266-201ENSMUST00000187999 405 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm28640-201ENSMUST00000190918 550 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm43033-201ENSMUST00000199682 425 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm44219-201ENSMUST00000203005 273 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm4510-201ENSMUST00000218265 427 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Chmp6P0C0A3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm23294-201ENSMUST00000104150 164 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm22210-201ENSMUST00000158101 144 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm4742-201ENSMUST00000200261 771 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms