Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 AC166159.1-201ENSMUST00000227154 1380 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Grik1-210ENSMUST00000228034 2708 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm12306-201ENSMUST00000117256 171 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm14826-201ENSMUST00000121284 901 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm23792-201ENSMUST00000122557 93 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Mir1903-201ENSMUST00000122574 80 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.97□□□□□ -1.45
Hoxd3P09027 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm35323-201ENSMUST00000191836 499 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm37492-201ENSMUST00000191948 376 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm43560-201ENSMUST00000198100 773 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm44161-201ENSMUST00000203532 253 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm44979-201ENSMUST00000206218 287 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 AC144783.1-201ENSMUST00000219103 960 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC5.97□□□□□ -1.45
Hoxd3P09027 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm26056-201ENSMUST00000083043 104 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm23678-201ENSMUST00000083157 107 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm23461-201ENSMUST00000083265 107 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm22365-201ENSMUST00000093750 117 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.97□□□□□ -1.45
Hoxd3P09027 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hoxd3P09027 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC5.97□□□□□ -1.45
Hoxd3P09027 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.96□□□□□ -1.45
Hoxd3P09027 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Hoxd3P09027 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hoxd3P09027 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC5.96□□□□□ -1.45
Hoxd3P09027 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Hoxd3P09027 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hoxd3P09027 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hoxd3P09027 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.96□□□□□ -1.45
Hoxd3P09027 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm44116-201ENSMUST00000204269 1525 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm12230-201ENSMUST00000118301 454 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm12186-201ENSMUST00000119050 945 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm12340-201ENSMUST00000121617 462 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm14362-201ENSMUST00000121679 273 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm15254-201ENSMUST00000149567 273 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Snora81-201ENSMUST00000157310 178 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm23533-201ENSMUST00000157540 245 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm22948-201ENSMUST00000158561 243 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms