Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.16□□□□□ -1.58
P06344 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
P06344 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.16□□□□□ -1.58
P06344 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P06344 Gm14679-201ENSMUST00000121536 722 ntBASIC5.16□□□□□ -1.58
P06344 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.16□□□□□ -1.58
P06344 Gm25363-201ENSMUST00000158850 245 ntBASIC5.16□□□□□ -1.58
P06344 Gm16112-201ENSMUST00000159075 382 ntBASIC5.16□□□□□ -1.58
P06344 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
P06344 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.16□□□□□ -1.58
P06344 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.16□□□□□ -1.58
P06344 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.16□□□□□ -1.58
P06344 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Gm38131-201ENSMUST00000192449 430 ntBASIC5.16□□□□□ -1.58
P06344 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.16□□□□□ -1.58
P06344 Gm38217-201ENSMUST00000194358 910 ntBASIC5.16□□□□□ -1.58
P06344 Gm37235-201ENSMUST00000195171 59 ntBASIC5.16□□□□□ -1.58
P06344 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
P06344 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.16□□□□□ -1.58
P06344 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.16□□□□□ -1.58
P06344 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.16□□□□□ -1.58
P06344 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.16□□□□□ -1.58
P06344 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
P06344 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Gm16335-201ENSMUST00000077495 309 ntBASIC5.16□□□□□ -1.58
P06344 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.16□□□□□ -1.58
P06344 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
P06344 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
P06344 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.16□□□□□ -1.58
P06344 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.16□□□□□ -1.58
P06344 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
P06344 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
P06344 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.15□□□□□ -1.58
P06344 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
P06344 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
P06344 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
P06344 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
P06344 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
P06344 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
P06344 Gm13311-201ENSMUST00000117863 379 ntBASIC5.15□□□□□ -1.59
P06344 Gm15660-201ENSMUST00000118997 478 ntBASIC5.15□□□□□ -1.59
P06344 Gm15877-201ENSMUST00000121897 964 ntBASIC5.15□□□□□ -1.59
P06344 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm26169-201ENSMUST00000158420 135 ntBASIC5.15□□□□□ -1.59
P06344 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm6047-201ENSMUST00000167221 574 ntBASIC5.15□□□□□ -1.59
P06344 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.15□□□□□ -1.59
P06344 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.15□□□□□ -1.59
P06344 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm27030-201ENSMUST00000182551 464 ntBASIC5.15□□□□□ -1.59
P06344 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.15□□□□□ -1.59
P06344 Gm8419-201ENSMUST00000189886 412 ntBASIC5.15□□□□□ -1.59
P06344 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.15□□□□□ -1.59
P06344 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.15□□□□□ -1.59
P06344 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.15□□□□□ -1.59
P06344 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.15□□□□□ -1.59
P06344 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.15□□□□□ -1.59
P06344 Gm17988-201ENSMUST00000208796 535 ntBASIC5.15□□□□□ -1.59
P06344 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
P06344 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.15□□□□□ -1.59
P06344 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.15□□□□□ -1.59
P06344 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.15□□□□□ -1.59
P06344 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.15□□□□□ -1.59
P06344 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.15□□□□□ -1.59
P06344 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.15□□□□□ -1.59
P06344 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.15□□□□□ -1.59
P06344 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P06344 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P06344 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
P06344 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.15□□□□□ -1.59
P06344 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.15□□□□□ -1.59
P06344 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.15□□□□□ -1.59
P06344 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
P06344 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.15□□□□□ -1.59
P06344 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
P06344 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
P06344 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.14□□□□□ -1.59
P06344 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
P06344 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.14□□□□□ -1.59
P06344 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
P06344 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
P06344 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
P06344 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms