Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm37407-201ENSMUST00000194793 1316 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm20486-201ENSMUST00000101544 128 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm23910-201ENSMUST00000104597 132 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm14786-201ENSMUST00000117127 944 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm14879-201ENSMUST00000117308 507 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm11406-201ENSMUST00000117418 484 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm14985-201ENSMUST00000118693 786 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm24592-201ENSMUST00000122505 106 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm9064-201ENSMUST00000163579 566 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm9597-201ENSMUST00000171913 602 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Mir3110-201ENSMUST00000175053 80 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Mir7669-201ENSMUST00000183442 58 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Mir7006-201ENSMUST00000183624 69 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm28149-201ENSMUST00000187102 378 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm28768-201ENSMUST00000189034 378 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm5853-201ENSMUST00000197183 632 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm42625-201ENSMUST00000198611 922 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm7557-201ENSMUST00000221935 865 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 AC153153.2-201ENSMUST00000223572 411 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 AC154747.1-201ENSMUST00000225265 239 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NpcdF8VQB8 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm43528-201ENSMUST00000199492 1674 ntBASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NpcdF8VQB8 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm13501-201ENSMUST00000118477 979 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm6806-201ENSMUST00000120092 1006 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm8009-201ENSMUST00000191672 436 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm43308-201ENSMUST00000197236 373 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm43724-201ENSMUST00000197516 226 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm42886-201ENSMUST00000199214 466 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gm46192-201ENSMUST00000217894 326 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 AC137902.2-201ENSMUST00000227989 576 ntBASIC7.82□□□□□ -1.16
NpcdF8VQB8 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC7.82□□□□□ -1.16
NpcdF8VQB8 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms