Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 CT025535.2-201ENSMUST00000228572 7441 ntBASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col4a6B1AVK5 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Gm24429-201ENSMUST00000104076 132 ntBASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col4a6B1AVK5 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm5182-201ENSMUST00000217708 6092 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm12654-201ENSMUST00000120387 587 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm25962-201ENSMUST00000157173 168 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm25389-201ENSMUST00000157340 286 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm25605-201ENSMUST00000158364 124 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm10319-202ENSMUST00000159439 846 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm7316-201ENSMUST00000165395 445 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm23872-201ENSMUST00000175432 77 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm27754-201ENSMUST00000183340 126 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm18553-201ENSMUST00000194152 634 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm18791-201ENSMUST00000204611 726 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col4a6B1AVK5 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Mir1193-201ENSMUST00000116761 121 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm11366-201ENSMUST00000119279 429 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm25427-201ENSMUST00000157605 103 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm5946-201ENSMUST00000182340 970 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm43436-201ENSMUST00000199308 147 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm44952-201ENSMUST00000204443 433 ntBASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col4a6B1AVK5 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms