Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm14485-201ENSMUST00000119489 493 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm15490-201ENSMUST00000119894 387 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm24685-201ENSMUST00000157764 285 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm20480-201ENSMUST00000173953 250 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm42720-201ENSMUST00000196813 300 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 AC116319.2-201ENSMUST00000228159 984 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a4A2AX52 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.82□□□□□ -1.64
Col6a4A2AX52 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.82□□□□□ -1.64
Col6a4A2AX52 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm14352-201ENSMUST00000119250 449 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm27855-201ENSMUST00000184122 128 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm29240-201ENSMUST00000187248 286 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm17847-201ENSMUST00000188261 1127 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm18702-201ENSMUST00000196923 588 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm38387-201ENSMUST00000191945 2577 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 AC121960.2-201ENSMUST00000227349 3446 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm12444-201ENSMUST00000121512 877 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm5353-201ENSMUST00000139800 793 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm3242-201ENSMUST00000171273 485 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm23459-201ENSMUST00000083259 131 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm45876-201ENSMUST00000212698 2709 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm37206-201ENSMUST00000195512 3069 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 AC135083.2-201ENSMUST00000228599 1456 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Gm21955-201ENSMUST00000194137 4968 ntBASIC4.81□□□□□ -1.64
Col6a4A2AX52 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm22657-201ENSMUST00000104197 132 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm25430-201ENSMUST00000157614 289 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm19169-201ENSMUST00000220109 1246 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Mir449a-201ENSMUST00000083641 91 ntBASIC4.8□□□□□ -1.64
Col6a4A2AX52 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Col6a4A2AX52 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms