Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm6049-201ENSMUST00000222369 458 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Mir449a-201ENSMUST00000083641 91 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm9386-201ENSMUST00000095195 381 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm12808-201ENSMUST00000120597 404 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Mir6417-201ENSMUST00000183815 116 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm42776-201ENSMUST00000198031 406 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm43444-201ENSMUST00000198123 291 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.33□□□□□ -1.4
Scn3aA2ASI5 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn3aA2ASI5 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm16007-201ENSMUST00000117837 286 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm22916-201ENSMUST00000157616 119 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm15812-201ENSMUST00000162331 748 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm28429-201ENSMUST00000188521 363 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scn3aA2ASI5 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm22194-201ENSMUST00000116869 95 ntBASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Mir3110-201ENSMUST00000175053 80 ntBASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.31□□□□□ -1.4
Scn3aA2ASI5 Gm4374-201ENSMUST00000204929 424 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms