Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm12442-201ENSMUST00000118372 338 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm16418-201ENSMUST00000118577 171 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm14098-201ENSMUST00000119295 623 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm14417-201ENSMUST00000120036 1074 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm12804-201ENSMUST00000121030 999 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm12399-201ENSMUST00000121475 446 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm6182-201ENSMUST00000156439 1208 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm2966-201ENSMUST00000166052 481 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm17204-201ENSMUST00000167936 478 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm2959-201ENSMUST00000169844 621 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm27185-201ENSMUST00000184296 247 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm37758-201ENSMUST00000194275 629 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Trav12-4-201ENSMUST00000200663 271 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm43850-201ENSMUST00000202021 578 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm17838-201ENSMUST00000205872 876 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm18805-201ENSMUST00000206872 655 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm18600-201ENSMUST00000207205 505 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm45473-201ENSMUST00000211452 616 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm19233-201ENSMUST00000219772 936 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm22300-201ENSMUST00000082661 126 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
H2afb3S4R1G7 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm26340-201ENSMUST00000102365 99 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm11799-201ENSMUST00000116110 460 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm12383-201ENSMUST00000120628 760 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm11107-201ENSMUST00000165414 505 ntBASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.47□□□□□ -1.53
H2afb3S4R1G7 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms