Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm43561-201ENSMUST00000199866 448 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm32158-201ENSMUST00000200135 404 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm17994-201ENSMUST00000209260 533 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm6009-201ENSMUST00000210848 280 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm9237-201ENSMUST00000221499 548 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm9292-201ENSMUST00000222008 710 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 AC131743.3-201ENSMUST00000222099 662 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Olfr519-201ENSMUST00000084752 960 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.85□□□□□ -1.47
Msh4Q99MT2 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msh4Q99MT2 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm25415-201ENSMUST00000104220 132 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm22953-201ENSMUST00000116724 101 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm25271-201ENSMUST00000157273 290 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm26000-201ENSMUST00000157991 107 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm6541-201ENSMUST00000165542 561 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm24561-201ENSMUST00000175182 95 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm3489-201ENSMUST00000190083 528 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm37884-201ENSMUST00000191857 818 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm5306-201ENSMUST00000203325 757 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm45269-201ENSMUST00000210359 282 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm38574-201ENSMUST00000211855 640 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm4928-201ENSMUST00000219622 850 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 AV026068-216ENSMUST00000223874 328 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msh4Q99MT2 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.84□□□□□ -1.47
Msh4Q99MT2 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Msh4Q99MT2 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.84□□□□□ -1.48
Msh4Q99MT2 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.84□□□□□ -1.48
Msh4Q99MT2 Naip3-201ENSMUST00000118082 4208 ntBASIC5.84□□□□□ -1.48
Msh4Q99MT2 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Msh4Q99MT2 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.83□□□□□ -1.48
Msh4Q99MT2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msh4Q99MT2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms