Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm12077-201ENSMUST00000117049 364 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm14679-201ENSMUST00000121536 722 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm15237-201ENSMUST00000122104 469 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm24767-201ENSMUST00000158509 95 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm17711-201ENSMUST00000172028 237 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm22650-201ENSMUST00000175138 105 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm24561-201ENSMUST00000175182 95 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm22852-201ENSMUST00000177899 101 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28196-201ENSMUST00000187719 640 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm5694-201ENSMUST00000195648 641 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm20940-201ENSMUST00000197308 360 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm43203-201ENSMUST00000200130 558 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm18205-201ENSMUST00000209215 841 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm45724-201ENSMUST00000213031 420 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm10145-201ENSMUST00000077776 462 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdk5rap3Q99LM2 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdk5rap3Q99LM2 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms