Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Brf1Q8CFK2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm12077-201ENSMUST00000117049 364 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm24435-201ENSMUST00000157886 110 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm3025-201ENSMUST00000163454 489 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm3077-201ENSMUST00000165903 627 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm2878-201ENSMUST00000170173 486 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Mir3473c-201ENSMUST00000175262 81 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm26595-201ENSMUST00000181585 484 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm44360-201ENSMUST00000200081 82 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm19900-201ENSMUST00000207285 576 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm20074-201ENSMUST00000208144 484 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm18645-202ENSMUST00000212222 760 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm20946-201ENSMUST00000212367 461 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm23624-201ENSMUST00000082463 321 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Brf1Q8CFK2 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm20486-201ENSMUST00000101544 128 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm12193-201ENSMUST00000117250 379 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm13772-201ENSMUST00000118431 317 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm14957-201ENSMUST00000121069 817 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm14212-201ENSMUST00000122023 826 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm26355-201ENSMUST00000158220 105 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Mir6244-201ENSMUST00000184156 117 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm29288-201ENSMUST00000191582 901 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm44392-201ENSMUST00000196758 115 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm7166-201ENSMUST00000199715 303 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm43105-201ENSMUST00000202987 459 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm44108-201ENSMUST00000203525 422 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 AC126043.1-201ENSMUST00000221304 1141 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm26203-201ENSMUST00000082911 114 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm10780-201ENSMUST00000099459 285 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms