Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm4832-201ENSMUST00000182679 399 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Mir7115-201ENSMUST00000184275 64 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm38040-201ENSMUST00000193505 225 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm9292-201ENSMUST00000222008 710 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.67□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm22952-201ENSMUST00000116720 120 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm16420-201ENSMUST00000120258 856 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm13998-201ENSMUST00000120952 335 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25782-201ENSMUST00000122526 289 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44219-201ENSMUST00000203005 273 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44307-201ENSMUST00000204466 764 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.66□□□□□ -1.5
Ccdc28bQ8CEG5 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm26340-201ENSMUST00000102365 99 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm25904-201ENSMUST00000158491 143 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm8826-201ENSMUST00000193161 948 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 Gm31711-201ENSMUST00000220687 196 ntBASIC5.65□□□□□ -1.5
Ccdc28bQ8CEG5 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms