Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp47Q8BY87 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Usp47Q8BY87 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Usp47Q8BY87 AL591843.1-201ENSMUST00000223686 3082 ntBASIC8.02□□□□□ -1.12
Usp47Q8BY87 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm43360-201ENSMUST00000197656 2887 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 AC116726.1-201ENSMUST00000215028 3497 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm11617-201ENSMUST00000119609 639 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm8032-201ENSMUST00000171009 574 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm26970-201ENSMUST00000182990 964 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Mir6903-201ENSMUST00000183597 88 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm38670-201ENSMUST00000199248 77 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm18587-201ENSMUST00000213736 841 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 n-R5s46-201ENSMUST00000083960 116 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm8141-201ENSMUST00000190856 1723 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm13590-201ENSMUST00000120183 1588 ntBASIC8.02□□□□□ -1.13
Usp47Q8BY87 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp47Q8BY87 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm24230-201ENSMUST00000104313 129 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm23211-201ENSMUST00000122717 308 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm23233-201ENSMUST00000157301 137 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm17511-201ENSMUST00000172206 342 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm23799-201ENSMUST00000175559 120 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm26738-201ENSMUST00000181312 601 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Mir6986-201ENSMUST00000184483 58 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm17952-201ENSMUST00000193914 747 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 AC154436.2-201ENSMUST00000227408 208 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 AC164295.2-201ENSMUST00000228539 757 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm10064-201ENSMUST00000071235 399 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 AC112142.1-203ENSMUST00000228670 2472 ntBASIC8.01□□□□□ -1.13
Usp47Q8BY87 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp47Q8BY87 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp47Q8BY87 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm25422-201ENSMUST00000104219 129 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm11826-201ENSMUST00000118781 438 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Gm12267-201ENSMUST00000121609 761 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Gm12650-201ENSMUST00000121966 258 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC8□□□□□ -1.13
Usp47Q8BY87 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC8□□□□□ -1.13
Usp47Q8BY87 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp47Q8BY87 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm8826-201ENSMUST00000193161 948 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm45008-201ENSMUST00000206420 493 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
Usp47Q8BY87 AC154806.5-205ENSMUST00000228828 411 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp47Q8BY87 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC8□□□□□ -1.13
Usp47Q8BY87 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm25682-201ENSMUST00000083942 164 ntBASIC8□□□□□ -1.13
Usp47Q8BY87 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp47Q8BY87 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp47Q8BY87 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms