Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp40Q8BWR4 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm12488-201ENSMUST00000122449 499 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm25102-201ENSMUST00000122479 112 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm23954-201ENSMUST00000157213 353 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm44138-201ENSMUST00000204939 271 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Api5-ps-201ENSMUST00000206607 577 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 AC124445.1-201ENSMUST00000218613 452 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm6841-201ENSMUST00000220602 598 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm5655-201ENSMUST00000221078 901 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr844-201ENSMUST00000054106 930 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm43328-201ENSMUST00000198544 1434 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp40Q8BWR4 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm14220-201ENSMUST00000118114 449 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm22817-201ENSMUST00000157448 356 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm26401-201ENSMUST00000158502 76 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm24767-201ENSMUST00000158509 95 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm2959-201ENSMUST00000169844 621 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm26914-201ENSMUST00000182262 223 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Mir7685-201ENSMUST00000183555 62 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Ighv5-19-201ENSMUST00000193466 297 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm37196-201ENSMUST00000194762 906 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm44615-201ENSMUST00000206548 358 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm8523-201ENSMUST00000211386 552 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm45874-201ENSMUST00000212423 346 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm46192-201ENSMUST00000217894 326 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC166358.3-201ENSMUST00000221456 181 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC125543.4-201ENSMUST00000223385 117 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC166830.1-201ENSMUST00000224201 533 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC091783.2-201ENSMUST00000224626 740 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm23456-201ENSMUST00000083335 137 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp40Q8BWR4 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Usp40Q8BWR4 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms