Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm27193-201ENSMUST00000184217 586 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm42428-201ENSMUST00000198677 302 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm44374-201ENSMUST00000199821 140 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm44538-201ENSMUST00000205615 348 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm10108-201ENSMUST00000078246 319 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Mir3068-201ENSMUST00000083004 136 ntBASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ccdc40Q8BI79 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm22231-201ENSMUST00000101027 73 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm13770-201ENSMUST00000117149 305 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm12307-201ENSMUST00000120581 590 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm8317-201ENSMUST00000121261 471 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm20778-201ENSMUST00000178524 627 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm4845-201ENSMUST00000179202 562 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm27004-201ENSMUST00000183300 727 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm43762-201ENSMUST00000201521 295 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm24029-201ENSMUST00000083928 143 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Ccdc40Q8BI79 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms