Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm22126-201ENSMUST00000083244 142 ntBASIC8.24□□□□□ -1.09
Usp48Q3V0C5 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 AC190403.1-201ENSMUST00000224515 1325 ntBASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.24□□□□□ -1.09
Usp48Q3V0C5 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Mir669d-2-201ENSMUST00000116854 86 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm15257-201ENSMUST00000177680 883 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm15252-201ENSMUST00000177750 883 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm15260-201ENSMUST00000179402 883 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Mir7008-201ENSMUST00000184398 63 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm18752-201ENSMUST00000192876 608 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm6057-201ENSMUST00000195927 314 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm32983-201ENSMUST00000208500 505 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm45789-201ENSMUST00000213038 364 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Mir129-2-201ENSMUST00000083577 90 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.23□□□□□ -1.09
Usp48Q3V0C5 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm15379-201ENSMUST00000121224 648 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm16412-201ENSMUST00000121602 273 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm24065-201ENSMUST00000157487 264 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm10177-202ENSMUST00000161698 207 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm8032-201ENSMUST00000171009 574 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm26509-201ENSMUST00000180947 948 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm29460-201ENSMUST00000188607 714 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm21803-201ENSMUST00000188897 693 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm28567-201ENSMUST00000190270 693 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm37430-201ENSMUST00000193039 196 ntBASIC8.22□□□□□ -1.09
Usp48Q3V0C5 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms