Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm8317-201ENSMUST00000121261 471 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm12732-201ENSMUST00000121688 180 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm11679-201ENSMUST00000121830 779 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm12293-201ENSMUST00000121898 590 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm15237-201ENSMUST00000122104 469 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm25826-201ENSMUST00000157090 137 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm26970-201ENSMUST00000182990 964 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Mir6971-201ENSMUST00000183497 63 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm43382-201ENSMUST00000198954 838 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm31166-201ENSMUST00000209326 288 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm19195-201ENSMUST00000222018 511 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm18247-201ENSMUST00000222937 601 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 AC137950.3-201ENSMUST00000228250 246 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm24454-201ENSMUST00000083349 132 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trafd1Q3UDK1 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trafd1Q3UDK1 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.71□□□□□ -1.49
Trafd1Q3UDK1 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Trafd1Q3UDK1 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.71□□□□□ -1.49
Trafd1Q3UDK1 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.71□□□□□ -1.49
Trafd1Q3UDK1 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm24065-201ENSMUST00000157487 264 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm22210-201ENSMUST00000158101 144 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm25433-201ENSMUST00000158283 286 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm17511-201ENSMUST00000172206 342 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm27037-201ENSMUST00000182270 960 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm37444-201ENSMUST00000193605 439 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm6631-201ENSMUST00000193699 559 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm9278-201ENSMUST00000205508 553 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm19182-201ENSMUST00000207139 577 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm19033-201ENSMUST00000208516 964 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm4510-201ENSMUST00000218265 427 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Snora30-201ENSMUST00000083325 130 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trafd1Q3UDK1 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Trafd1Q3UDK1 Gm7146-201ENSMUST00000116079 739 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms