Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.1□□□□□ -1.43
Trim43aQ3TL54 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim43aQ3TL54 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm6446-201ENSMUST00000120604 818 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm8317-201ENSMUST00000121261 471 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm23896-201ENSMUST00000158109 130 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm21542-201ENSMUST00000182307 993 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm37719-201ENSMUST00000194615 292 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm44571-201ENSMUST00000208092 533 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm18467-201ENSMUST00000208805 434 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm45870-201ENSMUST00000211269 601 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm45722-201ENSMUST00000213075 466 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim43aQ3TL54 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Trim43aQ3TL54 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trim43aQ3TL54 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.09□□□□□ -1.44
Trim43aQ3TL54 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trim43aQ3TL54 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm13641-201ENSMUST00000117993 473 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm15332-201ENSMUST00000118386 357 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm4660-201ENSMUST00000131499 403 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm17137-202ENSMUST00000165729 957 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm17366-201ENSMUST00000167629 187 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm8032-201ENSMUST00000171009 574 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm9671-201ENSMUST00000171502 547 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm20778-201ENSMUST00000178524 627 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm21399-201ENSMUST00000180210 597 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Mir7072-201ENSMUST00000184542 60 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm8581-201ENSMUST00000188636 890 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm18352-201ENSMUST00000189113 902 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm38040-201ENSMUST00000193505 225 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm43148-201ENSMUST00000198237 520 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm44382-201ENSMUST00000198683 122 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Gm38574-201ENSMUST00000211855 640 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim43aQ3TL54 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.08□□□□□ -1.44
Trim43aQ3TL54 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms